1. An improved kinetic model for the acetone-butanol-ethanol pathway of Clostridium acetobutylicum and model-based perturbation analysis, Rudong Li, Yuanyuan Li, Ling-Yi Lu, Cong Ren, Yi-Xue Li, *Lei Liu, BMC Systems Biology，2011 （in press）.
2. Using Pseudo Amino Acid Composition to Predict Protease Families by Incorporating a Series of Protein Biological Features, Lele Hu, Lulu Zheng, Zhiwen Wang, Bing Li, *Lei Liu, Protein & Peptide Letters, 2011 (in press).
3. The role of Hepatitis C Virus in the dynamic protein interaction networks of hepatocellular cirrhosis and carcinoma, Tao Huang, Lei Liu, Qi Liu, Guohui Ding, Yejun Tan, Zhidong Tu, Yixue Li, *Hongyue Dai, *Lu Xie, International Journal of Computational Biology and Drug Design, Inderscience, 4(1), pp 5-17, 2011.
4. Dysfunctional gene/protein networks in hepatitis C virus-induced hepatocellular cirrhosis and carcinoma, Huang, Tao, Ding, Guohui, Li, Yixue, Liu, Lei, Tan, Eugene, Dai, Hongyue, Liu, Qi, Tu, Zhidong, Xie, Lu, 2010 ACM International Conference on Bioinformatics and Computational Biology, ACM-BCB 2010, pp 502-507, 2010/8/2
5. ESCPP: An evaluation and alerting system for the compatibility between practice guidelines and practicing medicine using Arden syntax, Liu, Xingnan, Xu, Ye, Li, Zuofeng, Liu, Lei, Zhang, Xiaoyan, 1st International Conference on Information Science and Engineering, ICISE2009, pp 3649-3652, 2009/12/26
6. Comparison of AdaBoost and logistic regression for detecting colorectal cancer patients with synchronous liver metastasis, Wen, Jingran, Zhang, Xiaoyan, Xu, Ye, Li, Zuofeng, Liu, Lei, 2nd International Conference on Biomedical and Pharmaceutical Engineering, ICBPE 2009, 2009/12/2
7. Combinatorial network of primary and secondary microRNA-driven regulatory mechanisms, Tu, Kang, Yu, Hui, Hua, You-Jia, Li, Yuan-Yuan, Liu, Lei, Xie, Lu, Li, Yi-Xue, Nucleic Acids Research, 37(18), pp 5969-5980, 2009/10